MLPCN Archive

MLPCN Introduction

Small molecules, often with molecular weights of 500 or below, have proven to be extremely important to researchers to explore function at the molecular, cellular, and in vivo level. Such molecules have also been proven to be valuable for treating diseases, and most medicines marketed today are from this class. A key challenge is to identify small molecules effective at modulating a given biological process or disease state.

The Molecular Libraries Roadmap, through one of its components, the Molecular Libraries Probe Production Centers Network (MLPCN), offered biomedical researchers access to the large-scale screening capacity, along with medicinal chemistry and informatics necessary to identify chemical probes to study the functions of genes, cells, and biochemical pathways. 

NIH anticipated that these projects will facilitate the development of new drugs, by providing early stage chemical compounds that will enable researchers in the public and private sectors to validate new drug targets, which could then move into the drug-development pipeline. This is particularly true for rare diseases, which may not be attractive for development by the private sector.

UF Scripps Biomedical Research became part of the University of Florida’s academic health center in April of 2022. Previously, we were a branch of Scripps Research, also known as The Scripps Research Institute.

The Scripps Research Institute was awarded more than $80 million by the National Institutes of Health to greatly expand the work of The Scripps Research Institute Molecular Screening Center, further strengthening the collaborative efforts of teams of scientists at the La Jolla, California and Jupiter, Florida campuses. The six-year grant was the largest ever awarded to Scripps Research at the time.

The Scripps Research Institute Molecular Screening Center used Lead Identification’s high throughput robotics to screen discoveries made in laboratories in La Jolla and Jupiter, as well as other research institutions, against various biological targets. The goal was to uncover “proof-of-concept molecules” that could be useful in developing new treatments for a large number of human diseases.

The Scripps center was one of only four such large centers nationwide. Together with five smaller specialized centers, they comprised the Molecular Libraries Production Centers Network, a part of the NIH’s strategic funding plan, the Roadmap Initiative.

Please reference the table below to view all the public domain campaigns screened at UF Scripps. Filter drop down menus can be used to isolate areas of interest in the table. Use the “Clear Filters” button to regenerate all available campaigns. By clicking on the column name, lists can be sorted ascending/descending alphabetically. By clicking on the arrow on the right side of the column names, columns can be added/removed. Also, columns can be manually resized. To view available BioAssay Summaries on the PubChem website, please click on the relevant PubChem Summary AID number in the PubChem column.

The High-Throughput Molecular Screening Center screened over 150 assays as part of the MLPCN initiative, encompassing a broad and large variety of targets using numerous different detection technologies and assay formats during this time. A breakdown of public domain HTS campaign types by category can be found in the specific categories of: Target ClassAssay TypeHTS Class and Cell Line.

Probe Reports
To view all probe reports generated as part of Lead Identification’s MLPCN efforts, please click HERE.

MLPCN Pipeline
A table containing all the public domain campaigns screened at the High-Throughput Molecular Screening Center can be found below.

Target Class Target Subclass/Family Assay Type HTS Class Target/Pharm PubChem
Tissue Human Blood (T Cell) Viability Mammalian Cell Jurkat Cytox 1673
Transferase Kinase Enzymatic Biochemical FAK INH 1802
Transferase Kinase Enzymatic Biochemical JNK3 INH 746
Transferase Kinase Enzymatic Biochemical PKA INH 524
Transferase Kinase Enzymatic Biochemical ROCK2 INH 604
Receptor GPCR Reporter Gene Mammalian Cell 5HT1A AG 567
Receptor GPCR Reporter Gene Mammalian Cell 5HT1A ANT 612
Receptor GPCR Reporter Gene Mammalian Cell 5HT1E AG 1676
Receptor GPCR Reporter Gene Mammalian Cell 5HT1E ANT 1675
Receptor GPCR Reporter Gene Mammalian Cell S1P1 AG 449
Receptor GPCR Reporter Gene Mammalian Cell S1P1 ANT
Receptor GPCR Reporter Gene Mammalian Cell S1P2 AG 729
Receptor GPCR Reporter Gene Mammalian Cell S1P2 ANT 1657
Receptor GPCR Reporter Gene Mammalian Cell S1P3 AG 373
Receptor GPCR Reporter Gene Mammalian Cell S1P3 ANT 1820
Factor Transcription Factor Reporter Gene Mammalian Cell NFkB INH 1664
Receptor Nuclear Receptor Reporter Gene Mammalian Cell RAR INH
Receptor Nuclear Receptor Reporter Gene Mammalian Cell RORA / ACT 1954
Receptor Nuclear Receptor Reporter Gene Mammalian Cell RORA / INH 1901
Receptor Nuclear Receptor Reporter Gene Mammalian Cell SF-1 ACT 1951
Receptor Nuclear Receptor Reporter Gene Mammalian Cell SF-1 INH 1844
Hydrolase Aggrecanase Enzymatic Biochemical ADAMTS4 INH
Virus HIV Protein-RNA Biochemical HIV Rev-RRE INH 1667
Hydrolase Matrix Metalloproteinase Enzymatic Biochemical MMP-13 INH 1931
Hydrolase Matrix Metalloproteinase (Collagenase) Enzymatic Biochemical MMP-8
Hydrolase Glucosidase Enzymatic Biochemical β-gluc ENH 1670
Receptor Receptor Tyrosine Kinase Protein-Protein Biochemical EphB4 INH 1669
Receptor Nuclear Receptor Protein-Protein Biochemical PPARg/ Src1 AG 1808
Receptor Nuclear Receptor Protein-Protein Biochemical PPARg/ Src2 AG 1810
Receptor Nuclear Receptor Protein-Protein Biochemical PPARg/ Src3 AG 1812
Factor Transcription Factor Reporter Gene Mammalian Cell STAT-1 INH 1803
Factor Transcription Factor Reporter Gene Mammalian Cell STAT-1 ACT 1804
Factor Transcription Factor Reporter Gene Mammalian Cell STAT-3 ACT 1805
Factor Transcription Factor Reporter Gene Mammalian Cell STAT-3 INH 1806
STAT-5 INH
Receptor GPCR Complementation Mammalian Cell Mu-Delta IAG 504368
Receptor GPCR Complementation Mammalian Cell Mu-Delta AG 504355
Receptor Toll-like receptor Complementation Mammalian Cell TLR4 INH 1953
Receptor GPCR Reporter Gene Mammalian Cell GalR2 AG 1671
Receptor GPCR Reporter Gene Mammalian Cell GalR2 ANT 1668
Chaperone monomeric chaperone Reporter Gene Mammalian Cell Hsp70 ACT 1203
Hydrolase Matrix Metalloproteinase Enzymatic Mammalian Cell IDE ACT 493124
Hydrolase Matrix Metalloproteinase Enzymatic Mammalian Cell IDE INH 434984
Receptor GPCR Second Messenger Mammalian Cell NPY-Y1 ANT 1040
Receptor GPCR Second Messenger Mammalian Cell NPY-Y1 POT 1304
Receptor GPCR Second Messenger Mammalian Cell NPY-Y2 ANT 1791
Receptor GPCR Second Messenger Mammalian Cell NPY-Y2 POT 1359
Transferase Kinase Enzymatic Mammalian Cell PERK (ISR) INH 1842
Transferase Kinase Reporter Gene Mammalian Cell Wee1 Degr INH 1807
Chaperone Dimeric Chaperone Protein Renaturation Biochemical Hsp90 INH 1831
Hydrolase Peptidase Enzymatic Biochemical M1 INH 434966
Hydrolase Peptidase Enzymatic Biochemical M17 INH 434965
Channel Ion Channel Second Messenger Mammalian Cell TRPML3 AG 1809
Channel Ion Channel Second Messenger Mammalian Cell TRPN1 AG 1424
Transferase Kinase Viability Mammalian Cell Jak2 INH 1797
Tissue Mouse Blood (B Cell) Viability Mammalian Cell BAF3 Cytox 1486
Hydrolase Proteinase Enzymatic Biochemical Cathepsin L 1906
Tissue Rat Intestinal Epthelium Viability Mammalian Cell IEC-6 Cell Line 2201
Factor Transcription Factor Reporter Gene Mammalian Cell KLF5 INH 1858
Hydrolase Aminopeptidase Enzymatic Biochemical M18AAP INH 1855
Lipid Protein Lipid Droplet Scaffold Protein and Coactivator Protein Complementation Biochemical Abhd-Mldp Binding 493241
Lipid Protein Lipid Droplet Scaffold Protein and Coactivator Protein Complementation Biochemical Abhd-Plin Binding 493057
Factor Transcription Factor Reporter Gene Mammalian Cell AHR AG 2804
Receptor GPCR Second Messenger Mammalian Cell GPR7 ANT 1880
Transferase Phosphotransferase Enzymatic Biochemical TPT1 INH 1963
RNA Binding Protein STAR Protein-RNA Biochemical GLD-1 INH 2290
Hydrolase Beta-lactamase Enzymatic Biochemical IMP-1 INH 2715
Receptor Notch Viability Mammalian Cell Notch AG 434983
Hydrolase Beta-lactamase Enzymatic Biochemical VIM-2 INH 1854
Hydrolase Protease Enzymatic Biochemical 3CLpro INH 1859
DNA hairpin oligonucleotide DNA Binding Biochemical FID INH 1845
Oxidoreductase Transferase Protein-Activity Probe Biochemical GSTO1-1 INH 2175
Virus HIV Protein-Protein Biochemical HCV Core INH 1911
Oxidoreductase Oxidase Enzymatic Mammalian Cell Nox-1 INH 1796
Hydrolase Helicase Enzymatic Biochemical NS3 Helicase INH 1830
Transferase ATPase Enzymatic Biochemical P97 INH 1794
Virus Nuclear Antigen Protein-DNA Biochemical EBNA-1 INH 1955
Virus Nuclear Antigen Protein-DNA Biochemical ZTA INH 2234
Receptor GPCR Second Messenger Mammalian Cell V1R AG 2797
Hydrolase Esterase Protein-Activity Probe Biochemical LYPLA1 2202
Hydrolase Esterase Protein-Activity Probe Biochemical LYPLA2 2203
Receptor GPCR Second Messenger Mammalian Cell OTR AG 2482
Receptor GPCR Second Messenger Mammalian Cell OTR POT 2481
Hydrolase Esterase Protein-Activity Probe Biochemical PME-1 2143
Hydrolase Phosphatase Enzymatic Biochemical PP1 INH 2235
Hydrolase Phosphatase Enzymatic Biochemical PP5 INH 2034
Hydrolase Peptidase Protein-Activity Probe Biochemical FAM108B INH 2200
Mitochondrial Protein Bcl-2 Protein-Protein Biochemical Mcl-1 INH 2090
Mitochondrial Protein Bcl-2 Protein-Protein Biochemical Bcl-xL INH 2144
Receptor Nuclear Receptor Protein-Protein Biochemical NR2E3 AG 2325
Hydrolase Esterase Protein-Activity Probe Biochemical RBBP9 INH 1790
Receptor GPCR Reporter Gene Mammalian Cell S1P4 AG 1801
Receptor GPCR Reporter Gene Mammalian Cell S1P4 ANT 1853
Receptor GPCR Second Messenger Mammalian Cell CHO ANT 463079
Receptor GPCR Second Messenger Mammalian Cell Orexin 1 ANT 435008
Receptor GPCR Second Messenger Mammalian Cell OX1R ANT 485270
Hydrolase Deiminase Protein-Activity Probe Biochemical Pad4 INH 463083
Hydrolase Peptidase Protein-Activity Probe Biochemical PREPL INH 2760
Hydrolase Protease Protein-Activity Probe Biochemical Rv3671c INH 2652
Hydrolase Helicase and/or Nuclease Viability Bacterial Cell AddAB INH 449731
Tissue E. coli Viability Bacterial Cell E. coli Cytox 449728
Hydrolase Lipase Enzymatic Biochemical Dagl INH 504420
Hydrolase Esterase Protein-Activity Probe Biochemical pPAFAH INH 463092
Hydrolase Esterase Protein-Activity Probe Biochemical PAFAH1b2 INH 492971
Hydrolase Esterase Protein-Activity Probe Biochemical PAFAH1b3 INH 492979
Hydrolase Esterase Protein-Activity Probe Biochemical PAFAH2 INH 492969
Hydrolase Caspase Enzymatic Biochemical Procaspase3 ACT 463197
Hydrolase Caspase Enzymatic Biochemical Procaspase7 ACT 463210
Myofilament Troponin/Tropomysin/Actin Protein Conformation Biochemical RTF INH 504337
Myofilament Troponin/Tropomysin/Actin Protein Conformation Biochemical RTF ACT 493018
Receptor Nuclear Receptor Reporter Gene Mammalian Cell LRH1 IAG 488781